PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.18G144700.1.p
Common NameGLYMA_18G144700, LOC102661952
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 355aa    MW: 39659.9 Da    PI: 7.8918
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.18G144700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.57e-184696256
                  AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                         +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g+
  Glyma.18G144700.1.p 46 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDYAARAMRGA 96
                         59*******.**********93....35999**********************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.2E-114695IPR001471AP2/ERF domain
SuperFamilySSF541713.86E-2146103IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.5E-2946102IPR001471AP2/ERF domain
PROSITE profilePS5103222.23446103IPR001471AP2/ERF domain
SMARTSM003805.1E-3246109IPR001471AP2/ERF domain
CDDcd000184.45E-2946102No hitNo description
PRINTSPR003671.9E-94758IPR001471AP2/ERF domain
PRINTSPR003671.9E-96985IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    Send to blast
MEEALRRLNG MAPTQVPDTT VSDHHPKKSA TKRGLRDNAS SGGTMRYRGV RRRPWGRYAA  60
EIRDPQSKER RWLGTFDTAE EAACAYDYAA RAMRGAKART NFVYPDAADP HHHLFQPYNI  120
NPKHCHVTRW IPNQNLSADF STNGHNNNNP SSSSSSLNML LFRDFLNSSS HHFHNNNNNS  180
KSSSCYVNSS SSSSSATNCL QGCCFTNANF GMEVAEAIDE ESEFFPRESS DSGLLEEIVH  240
KFLPKSKPKN ETLSAPEMLP QPKFDHKNVS AAKGYADIRT RVPKVEAFGV PYDSSPVQQQ  300
FEALHHGFNT MQGVAMERNN QFVMNHVAAG CSNMEDFLQY PELFNSLAAR MQNA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-1847102359ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006603336.10.0PREDICTED: ethylene-responsive transcription factor ESR2-like
TrEMBLK7MS450.0K7MS45_SOYBN; Uncharacterized protein
STRINGGLYMA18G20962.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41003256
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.18e-14DORNROSCHEN-like